Package: lans2r 1.2.0
Sebastian Kopf
lans2r: Work with Look at NanoSIMS Data in R
R interface for working with nanometer scale secondary ion mass spectrometry (NanoSIMS) data exported from Look at NanoSIMS.
Authors:
lans2r_1.2.0.tar.gz
lans2r_1.2.0.zip(r-4.5)lans2r_1.2.0.zip(r-4.4)lans2r_1.2.0.zip(r-4.3)
lans2r_1.2.0.tgz(r-4.4-any)lans2r_1.2.0.tgz(r-4.3-any)
lans2r_1.2.0.tar.gz(r-4.5-noble)lans2r_1.2.0.tar.gz(r-4.4-noble)
lans2r_1.2.0.tgz(r-4.4-emscripten)lans2r_1.2.0.tgz(r-4.3-emscripten)
lans2r.pdf |lans2r.html✨
lans2r/json (API)
NEWS
| # Install 'lans2r' in R: |
| install.packages('lans2r', repos = c('https://kopflab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/kopflab/lans2r/issues
geobiologygeochemistryisotopesnanosims
Last updated 2 years agofrom:5dfc74e84a. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 12 2024 |
| R-4.5-win | OK | Nov 12 2024 |
| R-4.5-linux | OK | Nov 12 2024 |
| R-4.4-win | OK | Nov 12 2024 |
| R-4.4-mac | OK | Nov 12 2024 |
| R-4.3-win | OK | Nov 12 2024 |
| R-4.3-mac | OK | Nov 12 2024 |
Exports:calculatecalculate_abundancescalculate_ratioscalculate_sumsload_HMRload_LANS_mapsload_LANS_summaryplot_mapsread_map_dataread_roi_dataspread_data
Dependencies:clicolorspacecpp11dplyrfansifarvergenericsggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigplyrpurrrR.matlabR.methodsS3R.ooR.utilsR6RColorBrewerRcppreshape2rlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
NanoSIMS data processing of LANS data in R: how to use calculate
Rendered fromlans2r-calculate.Rmdusingknitr::rmarkdownon Nov 12 2024.Last update: 2020-06-24
Started: 2017-05-19
NanoSIMS data processing of LANS data in R: HMR files
Rendered fromlans2r-hmr.Rmdusingknitr::rmarkdownon Nov 12 2024.Last update: 2017-05-21
Started: 2017-05-20
NanoSIMS data processing of LANS data in R
Rendered fromlans2r.Rmdusingknitr::rmarkdownon Nov 12 2024.Last update: 2020-06-24
Started: 2017-05-19
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate derived data | calculate |
| Calculate isotope fractional abundances | calculate_abundances |
| Calculate isotope ratios | calculate_ratios |
| Calculate ion sums | calculate_sums |
| Read data from HMR txt files | load_HMR |
| Load LANS ion map data | load_LANS_maps |
| Load LANS summary data | load_LANS_summary |
| Plot NanoSIMS ion maps | plot_maps |
| Read LANS full ion map data (.mat) files | read_map_data |
| Read LANS data summary (.dac/.dat) files | read_roi_data |
| Spread data into wide format | spread_data |
