Package: lans2r 1.2.0
lans2r: Work with Look at NanoSIMS Data in R
R interface for working with nanometer scale secondary ion mass spectrometry (NanoSIMS) data exported from Look at NanoSIMS.
Authors:
lans2r_1.2.0.tar.gz
lans2r_1.2.0.zip(r-4.7-any)lans2r_1.2.0.zip(r-4.6-any)lans2r_1.2.0.zip(r-4.5-any)
lans2r_1.2.0.tgz(r-4.6-any)lans2r_1.2.0.tgz(r-4.5-any)
lans2r_1.2.0.tar.gz(r-4.7-any)lans2r_1.2.0.tar.gz(r-4.6-any)
lans2r_1.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
lans2r/json (API)
| # Install 'lans2r' in R: |
| install.packages('lans2r', repos = c('https://kopflab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/kopflab/lans2r/issues
geobiologygeochemistryisotopesnanosims
Last updated from:5dfc74e84a. Checks:2 NOTE, 7 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | NOTE | 160 | ||
| source / vignettes | OK | 237 | ||
| linux-release | OK | 158 | ||
| macos-release | OK | 168 | ||
| macos-oldrel | OK | 225 | ||
| windows-devel | NOTE | 85 | ||
| windows-release | OK | 101 | ||
| windows-oldrel | OK | 95 | ||
| wasm-release | OK | 130 |
Exports:calculatecalculate_abundancescalculate_ratioscalculate_sumsload_HMRload_LANS_mapsload_LANS_summaryplot_mapsread_map_dataread_roi_dataspread_data
Dependencies:clicpp11dplyrfarvergenericsggplot2gluegtableisobandlabelinglifecyclemagrittrpillarpkgconfigplyrpurrrR.matlabR.methodsS3R.ooR.utilsR6RColorBrewerRcppreshape2rlangS7scalesstringistringrtibbletidyrtidyselectutf8vctrsviridisLitewithr
Last update: 2020-06-24
Started: 2017-05-19
Last update: 2020-06-24
Started: 2017-05-19
Last update: 2017-05-21
Started: 2017-05-20
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate derived data | calculate |
| Calculate isotope fractional abundances | calculate_abundances |
| Calculate isotope ratios | calculate_ratios |
| Calculate ion sums | calculate_sums |
| Read data from HMR txt files | load_HMR |
| Load LANS ion map data | load_LANS_maps |
| Load LANS summary data | load_LANS_summary |
| Plot NanoSIMS ion maps | plot_maps |
| Read LANS full ion map data (.mat) files | read_map_data |
| Read LANS data summary (.dac/.dat) files | read_roi_data |
| Spread data into wide format | spread_data |